STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF64150.1annotation not available (555 aa)    
Predicted Functional Partners:
ABF64151.1
annotation not available
 
 0.912
ABF64152.1
annotation not available
 
  
 0.911
ABF64153.1
annotation not available
 
  
 0.819
ABF64554.1
annotation not available
 
 0.645
ABF64555.1
annotation not available
  
 0.596
ABF65091.1
annotation not available
  
     0.580
ABF64149.1
annotation not available
       0.565
ABF64556.1
annotation not available
 
  
 0.465
ABF64889.1
annotation not available
  
     0.455
ABF64557.1
annotation not available
 
     0.438
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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