STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcpQannotation not available (462 aa)    
Predicted Functional Partners:
cheR3
annotation not available
 
 0.947
cheR4
annotation not available
 
 0.930
cheR5
annotation not available
 
 0.892
aer
annotation not available
 
     0.600
ABF65618.1
annotation not available
  
 
 0.513
fliG
annotation not available
 
 
 0.465
fliI
annotation not available
 
   0.454
flgG
annotation not available
  
 
 0.453
flgC
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body
 
 
 0.448
flgD
Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein
 
  
 0.445
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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