Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABF62869.1 | ABF64587.1 | TM1040_0136 | TM1040_1854 | Response regulator receiver protein. | GAF sensor hybrid histidine kinase. | 0.980 |
ABF62869.1 | ABF64727.1 | TM1040_0136 | TM1040_1995 | Response regulator receiver protein. | Putative PAS/PAC sensor protein. | 0.918 |
ABF62869.1 | arcB | TM1040_0136 | TM1040_0342 | Response regulator receiver protein. | Multi-sensor hybrid histidine kinase. | 0.983 |
ABF62869.1 | cheR3 | TM1040_0136 | TM1040_0460 | Response regulator receiver protein. | MCP methyltransferase, CheR-type. | 0.959 |
ABF62869.1 | cheR4 | TM1040_0136 | TM1040_1028 | Response regulator receiver protein. | Signal transduction histidine kinase with CheB and CheR activity. | 0.989 |
ABF62869.1 | cheR5 | TM1040_0136 | TM1040_2227 | Response regulator receiver protein. | MCP methyltransferase, CheR-type. | 0.959 |
ABF62869.1 | hik | TM1040_0136 | TM1040_0221 | Response regulator receiver protein. | Histidine kinase. | 0.924 |
ABF62869.1 | hik-2 | TM1040_0136 | TM1040_0962 | Response regulator receiver protein. | PAS/PAC sensor hybrid histidine kinase. | 0.967 |
ABF62869.1 | mcpQ | TM1040_0136 | TM1040_1487 | Response regulator receiver protein. | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | 0.903 |
ABF62869.1 | pleC | TM1040_0136 | TM1040_2774 | Response regulator receiver protein. | Histidine kinase. | 0.971 |
ABF64587.1 | ABF62869.1 | TM1040_1854 | TM1040_0136 | GAF sensor hybrid histidine kinase. | Response regulator receiver protein. | 0.980 |
ABF64587.1 | ABF64727.1 | TM1040_1854 | TM1040_1995 | GAF sensor hybrid histidine kinase. | Putative PAS/PAC sensor protein. | 0.968 |
ABF64587.1 | arcB | TM1040_1854 | TM1040_0342 | GAF sensor hybrid histidine kinase. | Multi-sensor hybrid histidine kinase. | 0.991 |
ABF64587.1 | cheR3 | TM1040_1854 | TM1040_0460 | GAF sensor hybrid histidine kinase. | MCP methyltransferase, CheR-type. | 0.985 |
ABF64587.1 | cheR4 | TM1040_1854 | TM1040_1028 | GAF sensor hybrid histidine kinase. | Signal transduction histidine kinase with CheB and CheR activity. | 0.987 |
ABF64587.1 | cheR5 | TM1040_1854 | TM1040_2227 | GAF sensor hybrid histidine kinase. | MCP methyltransferase, CheR-type. | 0.983 |
ABF64587.1 | hik | TM1040_1854 | TM1040_0221 | GAF sensor hybrid histidine kinase. | Histidine kinase. | 0.967 |
ABF64587.1 | hik-2 | TM1040_1854 | TM1040_0962 | GAF sensor hybrid histidine kinase. | PAS/PAC sensor hybrid histidine kinase. | 0.990 |
ABF64587.1 | mcpQ | TM1040_1854 | TM1040_1487 | GAF sensor hybrid histidine kinase. | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | 0.965 |
ABF64587.1 | pleC | TM1040_1854 | TM1040_2774 | GAF sensor hybrid histidine kinase. | Histidine kinase. | 0.993 |
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