STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF64221.1annotation not available (854 aa)    
Predicted Functional Partners:
ABF63576.1
annotation not available
 
   
 0.765
ABF63282.1
annotation not available
  
   
 0.760
ABF64321.1
annotation not available
 
   
 0.748
fliK
annotation not available
  
     0.735
ABF63458.1
annotation not available
  
     0.731
ABF65205.1
annotation not available
 
     0.731
ABF64296.1
annotation not available
  
     0.729
ABF64301.1
annotation not available
  
     0.727
ABF64669.1
annotation not available
  
     0.726
ABF63264.1
annotation not available
 
 
 
 0.711
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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