STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF64246.1annotation not available (399 aa)    
Predicted Functional Partners:
ABF64245.1
annotation not available
  
 0.985
ABF64247.1
annotation not available
  
 0.979
ABF64248.1
annotation not available
  
 0.971
ABF64244.1
annotation not available
 
  
 0.917
ABF64968.1
annotation not available
  
 0.895
ABF64008.1
annotation not available
  
 0.770
ABF64965.1
annotation not available
  
 0.761
ABF64966.1
annotation not available
  
 0.735
ABF64007.1
annotation not available
  
 0.733
ABF64006.1
annotation not available
  
 0.724
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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