STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF64296.1annotation not available (230 aa)    
Predicted Functional Partners:
ABF64297.1
annotation not available
 
     0.847
ABF63263.1
annotation not available
 
  
 0.789
ABF63264.1
annotation not available
  
 
 
 0.784
ABF64301.1
annotation not available
  
     0.767
ABF64221.1
annotation not available
  
     0.729
ABF64840.1
annotation not available
  
     0.713
ABF64186.1
annotation not available
  
     0.710
ABF64239.1
annotation not available
  
     0.704
ABF63458.1
annotation not available
  
     0.699
ABF62969.1
annotation not available
  
     0.698
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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