STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF64332.1annotation not available (303 aa)    
Predicted Functional Partners:
ABF63864.1
annotation not available
 
    
0.814
paaK
Uncharacterized protein; tRNA-Pro1
 
 
 0.801
aprE
annotation not available
 
  
 0.724
ABF65210.1
annotation not available
 
  
 0.722
ABF61966.1
annotation not available
  
 0.667
ABF63261.1
annotation not available
 
  
 0.661
ABF65211.1
annotation not available
  
 0.652
ABF61977.1
annotation not available
   
 0.600
ABF63262.1
annotation not available
  
 0.529
ABF64221.1
annotation not available
 
     0.454
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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