STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gp18annotation not available (315 aa)    
Predicted Functional Partners:
ABF64355.1
annotation not available
 
     0.911
ABF64358.1
annotation not available
 
     0.875
ABF64359.1
annotation not available
 
     0.860
ABF64357.1
annotation not available
       0.849
ABF64354.1
annotation not available
       0.660
ABF64352.1
annotation not available
       0.647
ABF64353.1
annotation not available
       0.647
ABF64360.1
annotation not available
       0.593
ABF64033.1
annotation not available
 
   
 0.486
ABF63552.1
annotation not available
 
   
 0.445
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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