STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF64474.1annotation not available (143 aa)    
Predicted Functional Partners:
ABF64477.1
annotation not available
 
     0.875
ABF64475.1
annotation not available
 
     0.694
ABF63022.1
annotation not available
 
   
 0.611
ABF63134.1
annotation not available
  
 
 0.576
ccoN
annotation not available
  
 
 0.563
ABF64476.1
annotation not available
     
 0.555
ABF65555.1
annotation not available
     
 0.553
cysC
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate
      
 0.543
ABF63135.1
annotation not available
  
 
 0.527
msrP
Protein-methionine-sulfoxide reductase catalytic subunit MsrP; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecifi [...]
   
 
 0.526
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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