STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF64489.1annotation not available (250 aa)    
Predicted Functional Partners:
cysH
Phosphoadenylyl-sulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite; Belongs to the PAPS reductase family. CysH subfamily
 
  
 0.962
cysC
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate
 
  
 0.960
ABF64491.1
annotation not available
 
  
 0.953
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps; Belongs to the HMBS family
  
 0.931
ABF65560.1
annotation not available
  
 
 0.924
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
  
 
 0.920
ABF64945.1
annotation not available
    
 0.912
ABF64490.1
annotation not available
     
 0.861
ABF64493.1
annotation not available
       0.856
ABF64952.1
annotation not available
  
  
 
0.827
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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