STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF64599.1annotation not available (317 aa)    
Predicted Functional Partners:
ABF65163.1
annotation not available
  
     0.758
ABF63437.1
annotation not available
  
     0.753
ABF63875.1
annotation not available
  
     0.740
ABF64997.1
annotation not available
  
     0.723
ABF65650.1
annotation not available
  
     0.722
ABF65141.1
annotation not available
  
     0.712
ABF65383.1
annotation not available
  
     0.709
ABF65729.1
annotation not available
  
     0.709
ABF64907.1
annotation not available
  
     0.700
ABF64598.1
annotation not available
       0.694
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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