STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF64693.1annotation not available (235 aa)    
Predicted Functional Partners:
gshB
annotation not available
  
 
 0.922
ABF64689.1
annotation not available
  
 
 0.914
ABF64694.1
annotation not available
       0.883
ABF64293.1
annotation not available
  
  
  0.881
ABF62775.1
annotation not available
  
  
  0.878
ABF63186.1
annotation not available
  
  
  0.855
ABF62841.1
annotation not available
 
  
 
0.849
ABF64977.1
annotation not available
  
  
  0.838
ABF65557.1
annotation not available
  
  
  0.823
ABF62942.1
annotation not available
  
     0.678
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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