STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF64711.1annotation not available (240 aa)    
Predicted Functional Partners:
ABF64712.1
annotation not available
     
 0.682
ABF63282.1
annotation not available
  
    0.657
ABF62976.1
annotation not available
  
     0.644
ABF63576.1
annotation not available
  
     0.620
ABF64800.1
annotation not available
  
     0.580
ABF64495.1
annotation not available
  
     0.579
ABF63888.1
annotation not available
  
 
 0.574
ABF64539.1
annotation not available
  
     0.563
ABF63575.1
annotation not available
  
     0.550
ABF65555.1
annotation not available
      
 0.543
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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