STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF64720.1annotation not available (105 aa)    
Predicted Functional Partners:
ABF65731.1
annotation not available
  
     0.779
ABF63177.1
annotation not available
  
     0.777
ABF63235.1
annotation not available
  
     0.773
ABF65102.1
annotation not available
  
     0.772
ABF63594.1
annotation not available
  
     0.770
ABF64852.1
annotation not available
  
     0.770
ABF65198.1
annotation not available
  
     0.770
ABF63342.1
annotation not available
  
     0.769
ABF64236.1
annotation not available
  
     0.765
ABF64300.1
annotation not available
  
     0.764
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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