STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF64884.1annotation not available (182 aa)    
Predicted Functional Partners:
ABF64883.1
annotation not available
 
   
 0.970
ABF64885.1
annotation not available
 
    
0.917
ABF65086.1
annotation not available
 
  
 0.795
ABF65045.1
annotation not available
  
    0.758
ABF65085.1
annotation not available
 
     0.750
ABF65157.1
annotation not available
  
     0.735
ABF65084.1
annotation not available
 
     0.731
ABF64722.1
annotation not available
  
     0.710
ctpC
annotation not available
 
    0.695
ABF65075.1
annotation not available
  
     0.684
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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