STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF64914.1annotation not available (318 aa)    
Predicted Functional Partners:
ABF64916.1
annotation not available
 
     0.903
ABF64443.1
annotation not available
 
     0.840
ABF64915.1
annotation not available
 
     0.827
ABF64913.1
annotation not available
  
    0.781
ABF64876.1
annotation not available
  
     0.618
ABF63749.1
annotation not available
  
     0.565
ABF64178.1
annotation not available
  
     0.532
ABF63698.1
annotation not available
  
     0.470
ABF64903.1
annotation not available
  
     0.447
ABF64179.1
annotation not available
  
     0.430
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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