STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF64930.1annotation not available (59 aa)    
Predicted Functional Partners:
ABF64931.1
annotation not available
     
 0.706
ABF64932.1
annotation not available
  
  
 0.578
ABF65559.1
annotation not available
  
     0.561
ABF65136.1
annotation not available
  
     0.538
ABF65145.1
annotation not available
  
     0.536
ABF63847.1
annotation not available
  
     0.523
ABF62759.1
annotation not available
  
     0.518
ABF63380.1
annotation not available
  
     0.517
ABF64001.1
annotation not available
  
     0.502
ABF63483.1
annotation not available
  
     0.500
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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