STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF64992.1annotation not available (140 aa)    
Predicted Functional Partners:
lysS
annotation not available
       0.636
ABF63814.1
annotation not available
  
     0.565
ABF65112.1
annotation not available
  
     0.560
motA2
annotation not available
  
     0.493
ABF65098.1
annotation not available
  
     0.427
ABF62776.1
annotation not available
  
     0.424
ABF65296.1
annotation not available
  
     0.424
ABF64852.1
annotation not available
  
     0.422
ABF63081.1
annotation not available
  
     0.410
ABF65558.1
annotation not available
  
     0.407
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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