STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF65080.1annotation not available (414 aa)    
Predicted Functional Partners:
ABF65082.1
annotation not available
 
  
 0.970
ctpI
annotation not available
 
  
 0.967
ABF65081.1
annotation not available
 
  
 0.961
ABF65084.1
annotation not available
 
     0.947
ABF65085.1
annotation not available
 
     0.932
ABF65078.1
annotation not available
 
  
 0.927
ABF65086.1
annotation not available
 
     0.908
ctpC
annotation not available
 
  
 0.903
ABF65087.1
annotation not available
 
     0.868
ABF64883.1
annotation not available
 
   
 0.715
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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