STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF65102.1annotation not available (221 aa)    
Predicted Functional Partners:
ABF65101.1
annotation not available
       0.885
ABF65098.1
annotation not available
 
     0.820
ABF63177.1
annotation not available
  
     0.779
ABF64720.1
annotation not available
  
     0.772
ABF63390.1
annotation not available
  
     0.771
ABF63342.1
annotation not available
  
     0.758
ABF65198.1
annotation not available
  
     0.757
ABF64162.1
annotation not available
  
     0.754
ABF63430.1
annotation not available
  
     0.753
ABF64300.1
annotation not available
  
     0.751
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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