STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF65136.1annotation not available (321 aa)    
Predicted Functional Partners:
ABF65134.1
annotation not available
 
     0.968
ABF65133.1
annotation not available
 
     0.958
ABF65132.1
annotation not available
 
     0.949
ABF65138.1
annotation not available
 
     0.949
ABF65137.1
annotation not available
 
    
0.914
ABF65135.1
annotation not available
 
     0.899
ABF65131.1
annotation not available
 
     0.865
ABF65141.1
annotation not available
  
     0.759
ABF62969.1
annotation not available
  
     0.744
ABF65140.1
annotation not available
  
     0.719
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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