STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF65157.1annotation not available (278 aa)    
Predicted Functional Partners:
ABF65085.1
annotation not available
  
     0.779
ABF65084.1
annotation not available
  
     0.778
ABF65045.1
annotation not available
  
     0.770
ABF64883.1
annotation not available
  
     0.762
ABF64106.1
annotation not available
  
     0.760
ABF64885.1
annotation not available
  
     0.760
ABF65384.1
annotation not available
  
     0.760
ABF64083.1
annotation not available
  
     0.757
ABF65385.1
annotation not available
  
     0.751
ABF64699.1
annotation not available
  
     0.745
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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