STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF65249.1annotation not available (334 aa)    
Predicted Functional Partners:
ABF65250.1
annotation not available
  
   0.701
ABF65134.1
annotation not available
 
  
 0.662
ABF63783.1
annotation not available
  
 
 0.648
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
  
  
 0.569
ABF64598.1
annotation not available
     
 0.563
rpsU
annotation not available
       0.559
ABF65041.1
annotation not available
  
  
 0.557
ABF65555.1
annotation not available
   
  
 0.557
ABF63954.1
annotation not available
 
 
  
 0.449
ABF65248.1
annotation not available
  
  
 0.438
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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