STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
Node Content
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF65437.1
annotation not available (777 aa)
Predicted Functional Partners:
ABF65436.1
annotation not available
0.998
ABF63232.1
annotation not available
0.989
ABF65438.1
annotation not available
0.972
ABF64638.1
annotation not available
0.969
ABF64499.1
annotation not available
0.931
ade
annotation not available
0.905
ABF64101.1
annotation not available
0.903
ABF63667.1
annotation not available
0.902
gpt
Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily
0.900
ABF63230.1
annotation not available
0.841
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414 Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1
node2
node1 accession
node2 accession
node1 annotation
node2 annotation
score
ABF63230.1
ABF63232.1
TM1040_0497
TM1040_0499
annotation not available
annotation not available
0.970
ABF63230.1
ABF64499.1
TM1040_0497
TM1040_1766
annotation not available
annotation not available
0.419
ABF63230.1
ABF64638.1
TM1040_0497
TM1040_1905
annotation not available
annotation not available
0.765
ABF63230.1
ABF65436.1
TM1040_0497
TM1040_2704
annotation not available
annotation not available
0.804
ABF63230.1
ABF65437.1
TM1040_0497
TM1040_2705
annotation not available
annotation not available
0.841
ABF63232.1
ABF63230.1
TM1040_0499
TM1040_0497
annotation not available
annotation not available
0.970
ABF63232.1
ABF63667.1
TM1040_0499
TM1040_0934
annotation not available
annotation not available
0.902
ABF63232.1
ABF64101.1
TM1040_0499
TM1040_1368
annotation not available
annotation not available
0.900
ABF63232.1
ABF64638.1
TM1040_0499
TM1040_1905
annotation not available
annotation not available
0.968
ABF63232.1
ABF65436.1
TM1040_0499
TM1040_2704
annotation not available
annotation not available
0.813
ABF63232.1
ABF65437.1
TM1040_0499
TM1040_2705
annotation not available
annotation not available
0.989
ABF63232.1
ABF65438.1
TM1040_0499
TM1040_2706
annotation not available
annotation not available
0.810
ABF63232.1
ade
TM1040_0499
TM1040_2799
annotation not available
annotation not available
0.905
ABF63232.1
gpt
TM1040_0499
TM1040_1146
annotation not available
Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily
0.902
ABF63667.1
ABF63232.1
TM1040_0934
TM1040_0499
annotation not available
annotation not available
0.902
ABF63667.1
ABF64101.1
TM1040_0934
TM1040_1368
annotation not available
annotation not available
0.908
ABF63667.1
ABF64638.1
TM1040_0934
TM1040_1905
annotation not available
annotation not available
0.912
ABF63667.1
ABF65436.1
TM1040_0934
TM1040_2704
annotation not available
annotation not available
0.902
ABF63667.1
ABF65437.1
TM1040_0934
TM1040_2705
annotation not available
annotation not available
0.902
ABF63667.1
ade
TM1040_0934
TM1040_2799
annotation not available
annotation not available
0.906
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Network Stats
Network Stats analysis is still ongoing, please wait ...
Functional enrichments in your networkNote: some enrichments may be expected here (why?) explain columns
Enrichment analysis is still ongoing, please wait ...
Statistical background
For the above enrichment analysis, the following statistical background is assumed: