STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF65467.1annotation not available (303 aa)    
Predicted Functional Partners:
ABF65466.1
annotation not available
     0.978
ABF63276.1
annotation not available
  
 
 0.831
ABF62855.1
annotation not available
  
 
 0.827
ABF63275.1
annotation not available
  
 
 0.816
ABF64534.1
annotation not available
  
 
 0.816
ABF65465.1
annotation not available
 
   
 0.801
ABF62857.1
annotation not available
     
  0.800
ABF63277.1
annotation not available
     
  0.800
ABF65463.1
annotation not available
 
     0.773
ABF65464.1
annotation not available
 
     0.670
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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