STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF65474.1annotation not available (270 aa)    
Predicted Functional Partners:
ABF65475.1
annotation not available
 
 0.982
ABF65476.1
annotation not available
 
 0.978
ABF65477.1
annotation not available
 
 0.947
ABF65473.1
annotation not available
 
 
0.926
ABF65472.1
annotation not available
       0.856
ABF65471.1
annotation not available
 
     0.786
ABF63446.1
annotation not available
 
 0.762
ABF65417.1
annotation not available
 
 0.699
ABF65448.1
annotation not available
 
 0.653
ABF63447.1
annotation not available
 
 0.642
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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