STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF65479.1annotation not available (300 aa)    
Predicted Functional Partners:
ABF65480.1
annotation not available
 
   
 0.625
ABF65483.1
Microcystinase C; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC)
 
     0.596
ABF65481.1
annotation not available
     
 0.560
ABF65485.1
annotation not available
 
   
 0.520
ABF65486.1
annotation not available
 
     0.511
ABF63108.1
annotation not available
 
  
 0.487
ABF65482.1
annotation not available
       0.461
ABF65484.1
annotation not available
       0.406
ABF63096.1
annotation not available
 
  
 0.405
ABF63109.1
annotation not available
 
  
 0.402
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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