STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF65555.1annotation not available (1510 aa)    
Predicted Functional Partners:
ABF64234.1
annotation not available
 0.999
ABF65554.1
annotation not available
 0.999
ABF62864.1
annotation not available
 
 
 
0.989
ABF64882.1
annotation not available
  
 0.985
ABF62787.1
annotation not available
   
   0.980
ABF62875.1
annotation not available
   
   0.980
ABF65579.1
annotation not available
   
   0.980
flaA
annotation not available
   
   0.980
ABF63755.1
annotation not available
  
 
 0.976
ABF64569.1
annotation not available
  
 
 0.976
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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