STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF65665.1annotation not available (239 aa)    
Predicted Functional Partners:
ABF65666.1
annotation not available
 
     0.876
fecE
annotation not available
 
     0.874
ABF65667.1
annotation not available
       0.854
ABF63134.1
annotation not available
     
 0.658
ABF63282.1
annotation not available
  
     0.525
ABF63576.1
annotation not available
 
     0.507
ABF63479.1
annotation not available
     
 0.475
ABF64435.1
annotation not available
  
     0.438
ABF64539.1
annotation not available
  
     0.435
ABF64844.1
annotation not available
  
     0.425
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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