STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliLFlagellar protein FliL; Controls the rotational direction of flagella during chemotaxis (174 aa)    
Predicted Functional Partners:
fliN
annotation not available
 
  
 0.993
fliO
annotation not available
 
  
 0.989
fliF
Flagellar M-ring protein; The M ring may be actively involved in energy transduction
 
  
 0.989
flgB
annotation not available
 
  
 0.981
ABF65682.1
annotation not available
 
 
 0.975
ABF64239.1
annotation not available
 
 
 0.971
ABF65681.1
annotation not available
 
     0.971
fliG
annotation not available
 
  
 0.954
flgC
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body
 
  
 0.947
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation
 
  
 0.934
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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