STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliKannotation not available (528 aa)    
Predicted Functional Partners:
flgD
Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein
 
  
 0.993
flgJ
annotation not available
 
  
 0.982
ABF64239.1
annotation not available
 
  
 0.970
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation
  
  
 0.944
fliO
annotation not available
 
  
 0.942
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation
  
  
 0.931
fliI
annotation not available
  
  
 0.930
fliG
annotation not available
 
  
 0.929
fliL
Flagellar protein FliL; Controls the rotational direction of flagella during chemotaxis
 
  
 0.913
fliN
annotation not available
 
  
 0.899
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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