STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF65717.1annotation not available (248 aa)    
Predicted Functional Partners:
ABF65028.1
annotation not available
  
     0.749
ABF65742.1
annotation not available
  
     0.730
ABF65718.1
annotation not available
 
    0.698
ABF65716.1
Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine
     
 0.614
ABF65712.1
annotation not available
 
     0.606
ABF65715.1
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system
  
    0.542
ABF65713.1
annotation not available
       0.539
ABF65714.1
annotation not available
       0.539
ABF65321.1
annotation not available
  
  
 0.503
ABF62002.1
annotation not available
  
  
 0.406
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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