STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
virB5annotation not available (269 aa)    
Predicted Functional Partners:
virB1
annotation not available
 
   
 0.974
virB4
annotation not available
 
     0.973
virB10
annotation not available
 
     0.968
virB9
annotation not available
 
     0.968
virB8
annotation not available
 
     0.968
virB3
annotation not available
 
     0.967
virB6
annotation not available
 
     0.966
virB11
annotation not available
 
     0.959
virB2
annotation not available
 
     0.952
ABF61955.1
annotation not available
 
     0.921
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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