STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF61998.1annotation not available (433 aa)    
Predicted Functional Partners:
ABF61999.1
annotation not available
  
 0.978
uxaC
annotation not available
     0.922
ABF62000.1
annotation not available
 
  
 0.891
ABF61996.1
annotation not available
    
 0.881
ABF61994.1
annotation not available
       0.849
ABF61997.1
annotation not available
       0.849
ABF65482.1
annotation not available
  
 0.824
ABF64324.1
annotation not available
  
 0.788
ABF64801.1
annotation not available
 
  
 0.750
ABF64546.1
annotation not available
  
 0.713
Your Current Organism:
Ruegeria sp. TM1040
NCBI taxonomy Id: 292414
Other names: R. sp. TM1040, Ruegeria sp. TM1040, Silicibacter sp. TM1040
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