Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tbd_0951 | argA | Tbd_0951 | Tbd_0154 | Chorismate mutase. | Amino-acid N-acetyltransferase (ArgA); Belongs to the acetyltransferase family. ArgA subfamily. | 0.519 |
Tbd_0951 | proA | Tbd_0951 | Tbd_2442 | Chorismate mutase. | Gamma-glutamyl phosphate reductase GPR; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.571 |
Tbd_0951 | proB | Tbd_0951 | Tbd_1120 | Chorismate mutase. | Glutamate 5-kinase, ProB-related; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.522 |
Tbd_0951 | proC | Tbd_0951 | Tbd_2417 | Chorismate mutase. | Delta 1-pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.550 |
Tbd_0951 | ribB | Tbd_0951 | Tbd_2190 | Chorismate mutase. | 3,4-Dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.530 |
Tbd_1118 | Tbd_1119 | Tbd_1118 | Tbd_1119 | Conserved hypothetical protein DUF209; Belongs to the pirin family. | Putative lipoprotein. | 0.596 |
Tbd_1118 | Tbd_1121 | Tbd_1118 | Tbd_1121 | Conserved hypothetical protein DUF209; Belongs to the pirin family. | Alpha-ribazole-5`-phosphate phosphatase CobC, putative. | 0.596 |
Tbd_1118 | Tbd_1122 | Tbd_1118 | Tbd_1122 | Conserved hypothetical protein DUF209; Belongs to the pirin family. | Probable substrate-binding periplasmic (PBP) ABC transporter protein. | 0.596 |
Tbd_1118 | proB | Tbd_1118 | Tbd_1120 | Conserved hypothetical protein DUF209; Belongs to the pirin family. | Glutamate 5-kinase, ProB-related; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.596 |
Tbd_1119 | Tbd_1118 | Tbd_1119 | Tbd_1118 | Putative lipoprotein. | Conserved hypothetical protein DUF209; Belongs to the pirin family. | 0.596 |
Tbd_1119 | Tbd_1121 | Tbd_1119 | Tbd_1121 | Putative lipoprotein. | Alpha-ribazole-5`-phosphate phosphatase CobC, putative. | 0.773 |
Tbd_1119 | Tbd_1122 | Tbd_1119 | Tbd_1122 | Putative lipoprotein. | Probable substrate-binding periplasmic (PBP) ABC transporter protein. | 0.773 |
Tbd_1119 | proB | Tbd_1119 | Tbd_1120 | Putative lipoprotein. | Glutamate 5-kinase, ProB-related; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.773 |
Tbd_1121 | Tbd_1118 | Tbd_1121 | Tbd_1118 | Alpha-ribazole-5`-phosphate phosphatase CobC, putative. | Conserved hypothetical protein DUF209; Belongs to the pirin family. | 0.596 |
Tbd_1121 | Tbd_1119 | Tbd_1121 | Tbd_1119 | Alpha-ribazole-5`-phosphate phosphatase CobC, putative. | Putative lipoprotein. | 0.773 |
Tbd_1121 | Tbd_1122 | Tbd_1121 | Tbd_1122 | Alpha-ribazole-5`-phosphate phosphatase CobC, putative. | Probable substrate-binding periplasmic (PBP) ABC transporter protein. | 0.811 |
Tbd_1121 | proB | Tbd_1121 | Tbd_1120 | Alpha-ribazole-5`-phosphate phosphatase CobC, putative. | Glutamate 5-kinase, ProB-related; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.788 |
Tbd_1122 | Tbd_1118 | Tbd_1122 | Tbd_1118 | Probable substrate-binding periplasmic (PBP) ABC transporter protein. | Conserved hypothetical protein DUF209; Belongs to the pirin family. | 0.596 |
Tbd_1122 | Tbd_1119 | Tbd_1122 | Tbd_1119 | Probable substrate-binding periplasmic (PBP) ABC transporter protein. | Putative lipoprotein. | 0.773 |
Tbd_1122 | Tbd_1121 | Tbd_1122 | Tbd_1121 | Probable substrate-binding periplasmic (PBP) ABC transporter protein. | Alpha-ribazole-5`-phosphate phosphatase CobC, putative. | 0.811 |
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