Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tbd_1598 | Tbd_1617 | Tbd_1598 | Tbd_1617 | CheW protein. | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.950 |
Tbd_1598 | Tbd_1619 | Tbd_1598 | Tbd_1619 | CheW protein. | Chemotaxis sensory transducer. | 0.995 |
Tbd_1598 | Tbd_1620 | Tbd_1598 | Tbd_1620 | CheW protein. | Chemotaxis sensory transducer. | 0.995 |
Tbd_1598 | Tbd_1622 | Tbd_1598 | Tbd_1622 | CheW protein. | Chemotaxis sensory transducer. | 0.995 |
Tbd_1598 | Tbd_1623 | Tbd_1598 | Tbd_1623 | CheW protein. | CheW protein. | 0.977 |
Tbd_1598 | Tbd_1624 | Tbd_1598 | Tbd_1624 | CheW protein. | CheA Signal Transduction Histidine Kinases (STHK). | 0.999 |
Tbd_1598 | Tbd_2406 | Tbd_1598 | Tbd_2406 | CheW protein. | Chemotaxis sensory transducer. | 0.999 |
Tbd_1598 | Tbd_2548 | Tbd_1598 | Tbd_2548 | CheW protein. | CheA Signal Transduction Histidine Kinases (STHK). | 0.997 |
Tbd_1598 | cheB | Tbd_1598 | Tbd_1615 | CheW protein. | Response regulator receiver domain protein (CheY); Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.973 |
Tbd_1598 | cheD | Tbd_1598 | Tbd_1616 | CheW protein. | CheD, stimulates methylation of MCP proteins; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.910 |
Tbd_1617 | Tbd_1598 | Tbd_1617 | Tbd_1598 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | CheW protein. | 0.950 |
Tbd_1617 | Tbd_1619 | Tbd_1617 | Tbd_1619 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | Chemotaxis sensory transducer. | 0.990 |
Tbd_1617 | Tbd_1620 | Tbd_1617 | Tbd_1620 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | Chemotaxis sensory transducer. | 0.989 |
Tbd_1617 | Tbd_1622 | Tbd_1617 | Tbd_1622 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | Chemotaxis sensory transducer. | 0.988 |
Tbd_1617 | Tbd_1623 | Tbd_1617 | Tbd_1623 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | CheW protein. | 0.953 |
Tbd_1617 | Tbd_1624 | Tbd_1617 | Tbd_1624 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | CheA Signal Transduction Histidine Kinases (STHK). | 0.972 |
Tbd_1617 | Tbd_2406 | Tbd_1617 | Tbd_2406 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | Chemotaxis sensory transducer. | 0.991 |
Tbd_1617 | Tbd_2548 | Tbd_1617 | Tbd_2548 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | CheA Signal Transduction Histidine Kinases (STHK). | 0.924 |
Tbd_1617 | cheB | Tbd_1617 | Tbd_1615 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | Response regulator receiver domain protein (CheY); Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
Tbd_1617 | cheD | Tbd_1617 | Tbd_1616 | MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | CheD, stimulates methylation of MCP proteins; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.993 |
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