STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tbd_2288Phosphonate metabolism protein, PhnP. (255 aa)    
Predicted Functional Partners:
Tbd_2293
Phosphonate metabolism protein PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
 
 0.990
Tbd_2294
Phosphonate metabolism protein.
 
 
 0.955
Tbd_2290
Amidohydrolase-like protein.
 
  
 0.943
phnN
Guanylate kinase/L-type calcium channel region; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).
 
 
 0.939
Tbd_2291
ABC phosphonate transport system ATPase.
 
  
 0.937
Tbd_2295
Putative PhnH protein, phosphonate metabolism, function unknown.
 
  
 0.920
Tbd_2292
ABC phosphonate transport system ATPase.
 
  
 0.906
phnC
ABC phosphate/phosphonate transport system ATPase; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
  
  
 0.845
Tbd_2296
Hypothetical protein.
  
  
 0.836
Tbd_2297
ABC phosphonate permease.
     
 0.792
Your Current Organism:
Thiobacillus denitrificans ATCC 25259
NCBI taxonomy Id: 292415
Other names: T. denitrificans ATCC 25259, Thiobacillus denitrificans str. ATCC 25259, Thiobacillus denitrificans strain ATCC 25259
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