STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STH1273Xylulose kinase. (539 aa)    
Predicted Functional Partners:
STH1355
Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
 
 0.961
STH2338
Ribulose-5-phosphate 3-epimerase.
   
 0.944
STH1274
Putative sphingosine-1-phosphate lyase; Belongs to the group II decarboxylase family.
 
 
 0.889
STH188
Sugar isomerase.
 
  
 0.832
STH773
Ribose ABC transporter ATP-binding protein.
 
  
 0.671
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.659
STH796
PTS system fructose-specific IIBC component.
  
  
 0.644
STH1272
Conserved hypothetical protein.
       0.639
STH1986
Anaerobic sn-glycerol-3-phosphate dehydrogenase subunit A.
 
  
 0.627
pgi
Glucose-6-phosphate isomerase.
     
 0.617
Your Current Organism:
Symbiobacterium thermophilum
NCBI taxonomy Id: 292459
Other names: S. thermophilum IAM 14863, Symbiobacterium thermophilum IAM 14863, Symbiobacterium thermophilum str. IAM 14863, Symbiobacterium thermophilum strain IAM 14863
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.