STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STH1275NifA family transcriptional regulator. (916 aa)    
Predicted Functional Partners:
STH239
RNA polymerase sigma-54 factor.
 
 
 
 0.989
STH1387
Conserved hypothetical protein.
   
 
 0.915
STH952
PTS system cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
   
 0.862
STH1278
PTS system mannose-specific IID component.
 
  
 0.861
STH950
Transcription antiterminator BglG family.
 
   
 0.838
STH953
PTS system cellobiose-specific IIA component.
 
   
 0.838
STH951
PTS system cellobiose-specific IIB component.
 
   
 0.836
STH1276
PTS system mannose-specific IIB component.
 
  
 0.797
STH2312
Putative PTS system, IIA component.
 
   
 0.790
STH1277
PTS system mannose-specific IIA component.
 
  
 0.778
Your Current Organism:
Symbiobacterium thermophilum
NCBI taxonomy Id: 292459
Other names: S. thermophilum IAM 14863, Symbiobacterium thermophilum IAM 14863, Symbiobacterium thermophilum str. IAM 14863, Symbiobacterium thermophilum strain IAM 14863
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.