Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
STH1137 | STH2363 | STH1137 | STH2363 | Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Cystathionine gamma-synthase. | 0.977 |
STH1137 | STH2500 | STH1137 | STH2500 | Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 5-methyltetrahydrofolate S-homocysteine methyltransferase. | 0.927 |
STH1137 | STH2502 | STH1137 | STH2502 | Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Putative 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.855 |
STH1137 | STH2681 | STH1137 | STH2681 | Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | O-acetylhomoserine sulfhydrylase. | 0.860 |
STH1137 | STH2782 | STH1137 | STH2782 | Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | O-acetylhomoserine sulfhydrylase. | 0.860 |
STH1137 | ahcY | STH1137 | STH1697 | Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.884 |
STH2363 | STH1137 | STH2363 | STH1137 | Cystathionine gamma-synthase. | Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.977 |
STH2363 | STH2500 | STH2363 | STH2500 | Cystathionine gamma-synthase. | 5-methyltetrahydrofolate S-homocysteine methyltransferase. | 0.976 |
STH2363 | STH2502 | STH2363 | STH2502 | Cystathionine gamma-synthase. | Putative 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.971 |
STH2363 | STH2680 | STH2363 | STH2680 | Cystathionine gamma-synthase. | Conserved hypothetical protein. | 0.876 |
STH2363 | STH2681 | STH2363 | STH2681 | Cystathionine gamma-synthase. | O-acetylhomoserine sulfhydrylase. | 0.928 |
STH2363 | STH2739 | STH2363 | STH2739 | Cystathionine gamma-synthase. | Homoserine dehydrogenase. | 0.878 |
STH2363 | STH2782 | STH2363 | STH2782 | Cystathionine gamma-synthase. | O-acetylhomoserine sulfhydrylase. | 0.927 |
STH2363 | ahcY | STH2363 | STH1697 | Cystathionine gamma-synthase. | S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.925 |
STH2363 | metXA | STH2363 | STH1685 | Cystathionine gamma-synthase. | Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. | 0.912 |
STH2363 | thrB | STH2363 | STH2556 | Cystathionine gamma-synthase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.841 |
STH2500 | STH1137 | STH2500 | STH1137 | 5-methyltetrahydrofolate S-homocysteine methyltransferase. | Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.927 |
STH2500 | STH2363 | STH2500 | STH2363 | 5-methyltetrahydrofolate S-homocysteine methyltransferase. | Cystathionine gamma-synthase. | 0.976 |
STH2500 | STH2502 | STH2500 | STH2502 | 5-methyltetrahydrofolate S-homocysteine methyltransferase. | Putative 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.999 |
STH2500 | STH2681 | STH2500 | STH2681 | 5-methyltetrahydrofolate S-homocysteine methyltransferase. | O-acetylhomoserine sulfhydrylase. | 0.957 |
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