Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
STH2765 | STH727 | STH2765 | STH727 | Methyl-accepting chemotaxis protein. | Conserved hypothetical protein. | 0.589 |
STH2765 | cheA | STH2765 | STH1537 | Methyl-accepting chemotaxis protein. | Two-component sensor histidine kinase involved in chemotaxis, CheA. | 0.928 |
STH2765 | cheB | STH2765 | STH1541 | Methyl-accepting chemotaxis protein. | Chemotaxis protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.847 |
STH2765 | cheC | STH2765 | STH1538 | Methyl-accepting chemotaxis protein. | Chemotaxis signal transduction protein. | 0.710 |
STH2765 | cheD | STH2765 | STH1539 | Methyl-accepting chemotaxis protein. | Chemotaxis methylation protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.797 |
STH2765 | cheR | STH2765 | STH1542 | Methyl-accepting chemotaxis protein. | Chemotaxis protein methyltransferase. | 0.863 |
STH2765 | cheW1 | STH2765 | STH1356 | Methyl-accepting chemotaxis protein. | Chemotaxis signal transduction protein. | 0.874 |
STH2765 | cheW2 | STH2765 | STH1535 | Methyl-accepting chemotaxis protein. | Chemotaxis signal transduction protein. | 0.874 |
STH2765 | cheW3 | STH2765 | STH1536 | Methyl-accepting chemotaxis protein. | Chemotaxis signal transduction protein. | 0.874 |
STH2765 | cheY | STH2765 | STH1540 | Methyl-accepting chemotaxis protein. | Two-component response regulator involved in modulation of flagellar, CheY. | 0.566 |
STH727 | STH2765 | STH727 | STH2765 | Conserved hypothetical protein. | Methyl-accepting chemotaxis protein. | 0.589 |
STH727 | cheA | STH727 | STH1537 | Conserved hypothetical protein. | Two-component sensor histidine kinase involved in chemotaxis, CheA. | 0.744 |
STH727 | cheB | STH727 | STH1541 | Conserved hypothetical protein. | Chemotaxis protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.697 |
STH727 | cheR | STH727 | STH1542 | Conserved hypothetical protein. | Chemotaxis protein methyltransferase. | 0.932 |
STH727 | cheW1 | STH727 | STH1356 | Conserved hypothetical protein. | Chemotaxis signal transduction protein. | 0.609 |
STH727 | cheW2 | STH727 | STH1535 | Conserved hypothetical protein. | Chemotaxis signal transduction protein. | 0.609 |
STH727 | cheW3 | STH727 | STH1536 | Conserved hypothetical protein. | Chemotaxis signal transduction protein. | 0.609 |
STH727 | cheY | STH727 | STH1540 | Conserved hypothetical protein. | Two-component response regulator involved in modulation of flagellar, CheY. | 0.590 |
cheA | STH2765 | STH1537 | STH2765 | Two-component sensor histidine kinase involved in chemotaxis, CheA. | Methyl-accepting chemotaxis protein. | 0.928 |
cheA | STH727 | STH1537 | STH727 | Two-component sensor histidine kinase involved in chemotaxis, CheA. | Conserved hypothetical protein. | 0.744 |
page 1 of 6