STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT88620.1AP endonuclease. (334 aa)    
Predicted Functional Partners:
GAT88619.1
Dehydrogenase.
 
 
  0.938
GAT89361.1
Hypothetical protein.
 
 
  0.773
GAT88363.1
PTS lactose transporter subunit IIC.
    
  0.764
GAT87750.1
Oxidoreductase.
 
 
  0.750
GAT88622.1
Oxidoreductase.
  
 
  0.735
GAT87923.1
Hypothetical protein M707_16115.
 
 
  0.724
GAT87985.1
Dehydrogenase.
 
 
  0.710
GAT89794.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
  
 
 0.658
GAT88617.1
ABC transporter.
  
    0.642
GAT88618.1
ABC transporter permease.
  
    0.635
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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