mepM_2 protein (Clostridium thermoalcaliphilum)

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

mepM_2

Murein DD-endopeptidase MepM. (451 aa)

Predicted Functional Partners:

fliN

0.841

yaaH_1

0.709

pepN

0.640

mrcA

0.629

htrB

0.620

yocH

0.613

lytC

0.603

yycJ

0.599

cwlC_1

0.569

rlmH

0.569

Your Current Organism:

Clostridium thermoalcaliphilum

NCBI taxonomy Id: 29349
Other names: ATCC 51508, CIP 105528, DSM 7309, [. thermoalcaliphilum, [Clostridium] thermoalcaliphilum, strain JW/YL23-2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cwlC_1	lytC	CLOTH_02580	CLOTH_19180	Sporulation-specific N-acetylmuramoyl-L-alanine amidase.	N-acetylmuramoyl-L-alanine amidase LytC precursor.	0.831
cwlC_1	mepM_2	CLOTH_02580	CLOTH_14800	Sporulation-specific N-acetylmuramoyl-L-alanine amidase.	Murein DD-endopeptidase MepM.	0.569
cwlC_1	yaaH_1	CLOTH_02580	CLOTH_07930	Sporulation-specific N-acetylmuramoyl-L-alanine amidase.	Spore germination protein YaaH.	0.944
fliN	mepM_2	CLOTH_03810	CLOTH_14800	Flagellar motor switch protein FliN.	Murein DD-endopeptidase MepM.	0.841
htrB	mepM_2	CLOTH_14780	CLOTH_14800	Serine protease Do-like HtrB.	Murein DD-endopeptidase MepM.	0.620
htrB	pepN	CLOTH_14780	CLOTH_14810	Serine protease Do-like HtrB.	Aminopeptidase N.	0.650
htrB	rlmH	CLOTH_14780	CLOTH_14760	Serine protease Do-like HtrB.	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.	0.797
htrB	yycJ	CLOTH_14780	CLOTH_14790	Serine protease Do-like HtrB.	Putative metallo-hydrolase YycJ.	0.831
lytC	cwlC_1	CLOTH_19180	CLOTH_02580	N-acetylmuramoyl-L-alanine amidase LytC precursor.	Sporulation-specific N-acetylmuramoyl-L-alanine amidase.	0.831
lytC	mepM_2	CLOTH_19180	CLOTH_14800	N-acetylmuramoyl-L-alanine amidase LytC precursor.	Murein DD-endopeptidase MepM.	0.603
lytC	yaaH_1	CLOTH_19180	CLOTH_07930	N-acetylmuramoyl-L-alanine amidase LytC precursor.	Spore germination protein YaaH.	0.890
mepM_2	cwlC_1	CLOTH_14800	CLOTH_02580	Murein DD-endopeptidase MepM.	Sporulation-specific N-acetylmuramoyl-L-alanine amidase.	0.569
mepM_2	fliN	CLOTH_14800	CLOTH_03810	Murein DD-endopeptidase MepM.	Flagellar motor switch protein FliN.	0.841
mepM_2	htrB	CLOTH_14800	CLOTH_14780	Murein DD-endopeptidase MepM.	Serine protease Do-like HtrB.	0.620
mepM_2	lytC	CLOTH_14800	CLOTH_19180	Murein DD-endopeptidase MepM.	N-acetylmuramoyl-L-alanine amidase LytC precursor.	0.603
mepM_2	mrcA	CLOTH_14800	CLOTH_00110	Murein DD-endopeptidase MepM.	Penicillin-binding protein 1A.	0.629
mepM_2	pepN	CLOTH_14800	CLOTH_14810	Murein DD-endopeptidase MepM.	Aminopeptidase N.	0.640
mepM_2	rlmH	CLOTH_14800	CLOTH_14760	Murein DD-endopeptidase MepM.	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.	0.569
mepM_2	yaaH_1	CLOTH_14800	CLOTH_07930	Murein DD-endopeptidase MepM.	Spore germination protein YaaH.	0.709
mepM_2	yocH	CLOTH_14800	CLOTH_17320	Murein DD-endopeptidase MepM.	Cell wall-binding protein YocH precursor.	0.613