STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
capDCapD protein; Epimerizes UDP-galactose to UDP-glucose; Belongs to the polysaccharide synthase family. (341 aa)    
Predicted Functional Partners:
A1C_05295
COG0836 Mannose-1-phosphate guanylyltransferase.
  
  
 0.940
A1C_02490
COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.938
A1C_06055
COG1004 Predicted UDP-glucose 6-dehydrogenase.
  
 
 0.938
A1C_02495
Hypothetical protein.
  
  
 0.934
A1C_02510
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
 0.844
A1C_02680
Hypothetical protein; COG3307 Lipid A core - O-antigen ligase and related enzymes.
  
  
 0.809
A1C_02480
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
  
  
 0.807
A1C_00900
Mrp protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.716
A1C_02500
Hypothetical protein.
  
  
 0.657
A1C_02505
Hypothetical protein.
  
  
 0.638
Your Current Organism:
Rickettsia akari
NCBI taxonomy Id: 293614
Other names: R. akari str. Hartford, Rickettsia akari str. Hartford, Rickettsia akari strain Hartford
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.