STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amet_0271PFAM: 67 kDa myosin-cross-reactive antigen family protein; KEGG: ctc:CTC01855 67 kDa myosin-crossreactive streptococcal antigen. (554 aa)    
Predicted Functional Partners:
Amet_0270
Putative transcriptional regulator, TetR family; KEGG: ctc:CTC01854 transcriptional regulator.
 
     0.895
Amet_0294
Putative transcriptional regulator, TetR family; KEGG: ctc:CTC01854 transcriptional regulator.
 
     0.793
Amet_0272
Hypothetical protein.
       0.776
Amet_3357
PFAM: Streptomycin adenylyltransferase; KEGG: bce:BC1959 aminoglycoside 6-adenylyltransferase.
  
     0.439
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
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