Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Amet_0270 | Amet_0271 | Putative transcriptional regulator, TetR family; KEGG: ctc:CTC01854 transcriptional regulator. | PFAM: 67 kDa myosin-cross-reactive antigen family protein; KEGG: ctc:CTC01855 67 kDa myosin-crossreactive streptococcal antigen. | 0.895 |
Amet_0270 | Amet_0272 | Putative transcriptional regulator, TetR family; KEGG: ctc:CTC01854 transcriptional regulator. | Hypothetical protein. | 0.490 |
Amet_0271 | Amet_0270 | PFAM: 67 kDa myosin-cross-reactive antigen family protein; KEGG: ctc:CTC01855 67 kDa myosin-crossreactive streptococcal antigen. | Putative transcriptional regulator, TetR family; KEGG: ctc:CTC01854 transcriptional regulator. | 0.895 |
Amet_0271 | Amet_0272 | PFAM: 67 kDa myosin-cross-reactive antigen family protein; KEGG: ctc:CTC01855 67 kDa myosin-crossreactive streptococcal antigen. | Hypothetical protein. | 0.776 |
Amet_0271 | Amet_0294 | PFAM: 67 kDa myosin-cross-reactive antigen family protein; KEGG: ctc:CTC01855 67 kDa myosin-crossreactive streptococcal antigen. | Putative transcriptional regulator, TetR family; KEGG: ctc:CTC01854 transcriptional regulator. | 0.793 |
Amet_0271 | Amet_3357 | PFAM: 67 kDa myosin-cross-reactive antigen family protein; KEGG: ctc:CTC01855 67 kDa myosin-crossreactive streptococcal antigen. | PFAM: Streptomycin adenylyltransferase; KEGG: bce:BC1959 aminoglycoside 6-adenylyltransferase. | 0.439 |
Amet_0272 | Amet_0270 | Hypothetical protein. | Putative transcriptional regulator, TetR family; KEGG: ctc:CTC01854 transcriptional regulator. | 0.490 |
Amet_0272 | Amet_0271 | Hypothetical protein. | PFAM: 67 kDa myosin-cross-reactive antigen family protein; KEGG: ctc:CTC01855 67 kDa myosin-crossreactive streptococcal antigen. | 0.776 |
Amet_0294 | Amet_0271 | Putative transcriptional regulator, TetR family; KEGG: ctc:CTC01854 transcriptional regulator. | PFAM: 67 kDa myosin-cross-reactive antigen family protein; KEGG: ctc:CTC01855 67 kDa myosin-crossreactive streptococcal antigen. | 0.793 |
Amet_3357 | Amet_0271 | PFAM: Streptomycin adenylyltransferase; KEGG: bce:BC1959 aminoglycoside 6-adenylyltransferase. | PFAM: 67 kDa myosin-cross-reactive antigen family protein; KEGG: ctc:CTC01855 67 kDa myosin-crossreactive streptococcal antigen. | 0.439 |