STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amet_1393Hypothetical protein; KEGG: cph:Cpha266_0062 NADPH-dependent FMN reductase. (406 aa)    
Predicted Functional Partners:
Amet_4277
KEGG: rxy:Rxyl_3061 hypothetical protein.
  
     0.593
Amet_4629
PFAM: extracellular solute-binding protein, family 1; KEGG: bha:BH0513 iron(III) transport system substrate-binding protein.
  
     0.590
Amet_0511
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.581
Amet_4628
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0514 iron(III) transport system permease protein.
  
     0.537
Amet_3466
PFAM: Ferritin, Dps family protein; KEGG: fnu:FN1079 neutrophil-activating protein A; Belongs to the Dps family.
  
  
 0.517
Amet_1529
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sat:SYN_00718 lactoylglutathione lyase.
  
     0.471
Amet_1394
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FMN-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ctc:CTC00811 fumarate reductase flavoprotein subunit precursor.
     
 0.423
Amet_3717
PFAM: ABC-2 type transporter; KEGG: bcl:ABC2123 multidrug ABC transporter permease.
  
     0.423
Amet_1431
PFAM: beta-lactamase; KEGG: btk:BT9727_2440 alkaline D-peptidase (D-stereospecific peptide hydrolase).
  
    0.411
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
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