STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Amet_1693Hypothetical protein. (71 aa)    
Predicted Functional Partners:
Amet_1691
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: btk:BT9727_0923 probable two-component response regulator; probable MrsR2 protein.
       0.423
Amet_1692
PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; KEGG: cac:CAC0290 sensory transduction histidine kinase.
       0.423
Amet_1694
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: tte:TTE0177 uncharacterized Fe-S center protein.
       0.410
Your Current Organism:
Alkaliphilus metalliredigens
NCBI taxonomy Id: 293826
Other names: A. metalliredigens QYMF, Alkaliphilus metalliredigens QYMF, Alkaliphilus metalliredigens str. QYMF, Alkaliphilus metalliredigens strain QYMF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.