STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FLB_25440Class III cytochrome C family protein. (357 aa)    
Predicted Functional Partners:
FLB_13300
Hypothetical protein; Cytochrome c oxidase subunit 1 homolog, bacteroid; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
FLB_25480
Cytochrome c.
 
 0.969
ttrB
Tetrathionate reductase subunit B precursor.
 
 
 0.945
FLB_25470
Hypothetical protein.
 
 
 0.934
FLB_25460
Polysulfide reductase, NrfD.
 
   
 0.914
FLB_25490
Hypothetical protein.
 
    0.890
coxM
Alternative cytochrome c oxidase subunit 2.
    
 0.766
coxN
Alternative cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
    
 0.726
bkdA2
2-oxoisovalerate dehydrogenase subunit beta.
  
  
  0.708
glpC
Anaerobic glycerol-3-phosphate dehydrogenase subunit C.
    
 0.658
Your Current Organism:
Flavobacterium succinicans
NCBI taxonomy Id: 29536
Other names: CIP 104744, Cytophaga succinicans, DSM 4002, F. succinicans, Flavobacterium sp. DD5b, Flexibacter succinicans, IFO 14905, JCM 21151, LMG 10402, LMG:10402, NBRC 14905, NCIMB 2277, strain 8
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