STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_93G00540Alkaline phytoceramidase. (256 aa)    
Predicted Functional Partners:
A0A0K9PLQ0
Ceramide kinase.
    
 0.917
ZOSMA_8G01130
Sphingolipid delta(4)-desaturase DES1-like; Sphingolipid-delta-4-desaturase required for the biosynthesis of delta-4-unsaturated sphingolipids and derivatives.
   
 
 0.896
A0A0K9P2Y1
Long Chain Base Kinase.
    
 0.891
ZOSMA_8G00900
UDP-Glc: ceramide beta-glucosyltransferase, family GT21.
     
 0.889
ZOSMA_46G00660
Long Chain Base 1-Phosphate Phosphatase.
     
 0.888
ZOSMA_20G01280
Sphingobase C4-Hydroxylase; Belongs to the sterol desaturase family.
     
 0.871
ZOSMA_2G02590
Sphingobase C4-Hydroxylase; Belongs to the sterol desaturase family.
     
 0.865
A0A0K9PU55
Sphingobase C4-Hydroxylase; Belongs to the sterol desaturase family.
     
 0.865
ZOSMA_71G00350
Sphingoid long-chain bases kinase 2, mitochondrial.
    
 0.796
ZOSMA_10G00890
Long Chain Base Kinase.
    
 0.796
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.