STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_83G00230F-box protein. (397 aa)    
Predicted Functional Partners:
ZOSMA_22G00540
BZIP transcription factor.
    
 0.999
A0A0K9PW72
Putative Transcription elongation factor B polypeptide; Belongs to the SKP1 family.
     
 0.867
ZOSMA_14G01640
Transcription elongation factor B polypeptide 2.
     
 0.798
A0A0K9PEF2
26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
     
 0.669
ZOSMA_36G00400
Putative 26S protease regulatory subunit; Belongs to the AAA ATPase family.
   
 
  0.668
ZOSMA_17G00470
26S proteasome non-ATPase regulatory subunit.
   
 
  0.667
A0A0K9PHR7
26S proteasome regulatory subunit N8.
    
  0.666
A0A0K9P2H9
Ubiquitin-40S ribosomal protein S27a-1.
     
 0.663
ZOSMA_24G01040
Ubiquitin-40S ribosomal protein S27a.
     
 0.663
ZOSMA_49G00360
Putative 26S proteasome regulatory subunit S3.
   
 
  0.661
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
Server load: low (30%) [HD]