STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZOSMA_7G00550Putative Sugar transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (518 aa)    
Predicted Functional Partners:
A0A0K9PLQ0
Ceramide kinase.
    
 0.428
ZOSMA_46G00660
Long Chain Base 1-Phosphate Phosphatase.
    
 0.418
ZOSMA_71G00350
Sphingoid long-chain bases kinase 2, mitochondrial.
    
  0.413
A0A0K9P2Y1
Long Chain Base Kinase.
    
  0.413
ZOSMA_10G00890
Long Chain Base Kinase.
    
  0.413
Your Current Organism:
Zostera marina
NCBI taxonomy Id: 29655
Other names: Z. marina, Zostera marina L.
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